Any data files can be found on the Downloads page.
Where can I find the protocols used for sample preparation/extraction, data processing, etc.?All protocols can be found on the Protocols page.
Where can I get metadata for the data files?Metadata can be found on the Downloads page:
What is the format of provenance logs?
Provenance logs are generated by the AnADAMA2 workflow system during runtime and are plain-text files containing all steps executed, warnings, debug and error messages when present.
Does an NCBI BioProject exist that is associated with the data?IBDMDB data is associated with the following BioProject: PRJNA398089
Any other questions, comments or support requests for the IBDMDB can be made on the ibdmdb-users Discourse Forum: ibdmdb-users